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* iceberg maintenance: record column statistics on compacted files A compacted file's manifest entry was built with no column_sizes, value_counts, null_value_counts, lower_bounds, upper_bounds or split_offsets, so no reader could skip a compacted file on any predicate. parquet-go already writes exact per-chunk min/max and null counts into the footer; read that footer back after the merge and record it on the data file, bounds as the spec's single-value serialization with string and binary truncated as truncate(16). A column whose bounds cannot be converted exactly gets none, and a statistics failure is logged while the compaction commits anyway: metrics are an optimization, not a correctness requirement. Generated with [Devin](https://devin.ai) Co-Authored-By: Devin <158243242+devin-ai-integration[bot]@users.noreply.github.com> * iceberg maintenance: merge bins in bound order so compacted files stay prunable A bin's files were concatenated in manifest order, or largest-first when a partition was split under the target size, so inputs disjoint on a column came out as outputs that overlapped on it. Order each bin's files by their bounds on one column before merging and split an oversized partition into runs of consecutive files, so every output covers one contiguous range. The column is the first identity field of the table's sort order when it declares one (a descending order sorts by upper bound), otherwise the first schema column every candidate file has bounds for; detection resolves the same order so it plans the bins execution builds. Files without bounds keep the old behavior. Generated with [Devin](https://devin.ai) Co-Authored-By: Devin <158243242+devin-ai-integration[bot]@users.noreply.github.com> * iceberg maintenance: cap compacted files' row groups from table config Neither merge writer set a row-group limit (parquet-go's default is unlimited rows), so every compacted file was a single row group and readers could not skip inside it either. Rows per row group now come from the table's write.parquet.row-group-limit and write.parquet.row-group-size-bytes, defaulting to PyIceberg's 1 048 576 rows and Iceberg's 128 MiB, with the byte size turned into rows from the bin's inputs' compressed bytes per row and a floor of 1 024 rows. Both writers take the cap, and the statistics the entry records list one split offset per row group. Generated with [Devin](https://devin.ai) Co-Authored-By: Devin <158243242+devin-ai-integration[bot]@users.noreply.github.com> * iceberg: keep compaction order eligibility per group, rescue stranded runs The merge order resolved over all candidates, so one oversized or non-Parquet file without bounds disabled ordering for files that could participate. Resolve it per partition group over the eligible entries. Ordered runs too short to merge were dropped entirely. Runs from an inferred bounds order now fall back to size-based packing — ordering is a preference there — while runs under a declared sort order are still left for later passes so the sort contract holds. An explicit write.parquet.row-group-limit is a cap, not a floor: values below the estimate floor are now honored instead of being raised. Generated with [Devin](https://devin.ai) Co-Authored-By: Devin <158243242+devin-ai-integration[bot]@users.noreply.github.com> * iceberg: only use the declared sort order when its bounds are complete An entry without bounds on the sort column sorted to the tail and merged into an output claiming an order it cannot verify. Fall back to bound inference instead of ordering by a later sort field alone. Generated with [Devin](https://devin.ai) Co-Authored-By: Devin <158243242+devin-ai-integration[bot]@users.noreply.github.com> * iceberg maintenance: keep ordered runs when the full repack yields nothing The bestEffort leftover fallback removed the ordered runs before checking whether repacking the whole bin produced any bins, discarding valid compaction work. Generated with [Devin](https://devin.ai) Co-Authored-By: Devin <158243242+devin-ai-integration[bot]@users.noreply.github.com> --------- Co-authored-by: Devin <158243242+devin-ai-integration[bot]@users.noreply.github.com>
1372 lines
43 KiB
Go
1372 lines
43 KiB
Go
package iceberg
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import (
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"bytes"
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"context"
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"crypto/rand"
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"encoding/hex"
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"encoding/json"
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"errors"
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"fmt"
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"io"
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"os"
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"path"
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"sort"
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"strings"
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"time"
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"github.com/apache/iceberg-go"
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"github.com/apache/iceberg-go/table"
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"github.com/parquet-go/parquet-go"
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"github.com/seaweedfs/seaweedfs/weed/glog"
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"github.com/seaweedfs/seaweedfs/weed/pb/filer_pb"
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"github.com/seaweedfs/seaweedfs/weed/s3api/s3tables"
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"google.golang.org/grpc/codes"
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"google.golang.org/grpc/status"
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)
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// compactionBin groups small data files from the same partition and spec for merging.
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type compactionBin struct {
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PartitionKey string
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Partition map[int]any
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SpecID int32
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Entries []iceberg.ManifestEntry
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TotalSize int64
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}
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// compactDataFiles reads manifests to find small Parquet data files, groups
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// them by partition, reads and merges them using parquet-go, and commits new
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// manifest entries.
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func (h *Handler) compactDataFiles(
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ctx context.Context,
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filerClient filer_pb.SeaweedFilerClient,
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bucketName, tablePath string,
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config Config,
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onProgress func(binIdx, totalBins int),
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) (string, map[string]int64, error) {
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start := time.Now()
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state, err := loadCurrentMetadata(ctx, filerClient, bucketName, tablePath)
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if err != nil {
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return "", nil, fmt.Errorf("load metadata: %w", err)
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}
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meta, dataPath := state.Metadata, state.DataPath
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predicate, err := parsePartitionPredicate(config.Where, meta)
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if err != nil {
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return "", nil, err
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}
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currentSnap := meta.CurrentSnapshot()
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if currentSnap == nil || currentSnap.ManifestList == "" {
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return "no current snapshot", nil, nil
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}
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rewritePlan, err := resolveCompactionRewritePlan(config, meta)
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if err != nil {
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return "", nil, fmt.Errorf("resolve rewrite strategy: %w", err)
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}
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// Read manifest list
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manifestListData, err := loadFileByIcebergPath(ctx, filerClient, bucketName, dataPath, currentSnap.ManifestList)
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if err != nil {
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return "", nil, fmt.Errorf("read manifest list: %w", err)
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}
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manifests, err := s3tables.ReadManifestList(manifestListData)
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if err != nil {
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return "", nil, fmt.Errorf("parse manifest list: %w", err)
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}
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// Separate data manifests from delete manifests.
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var dataManifests, deleteManifests []iceberg.ManifestFile
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for _, mf := range manifests {
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if mf.ManifestContent() == iceberg.ManifestContentData {
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dataManifests = append(dataManifests, mf)
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} else {
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deleteManifests = append(deleteManifests, mf)
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}
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}
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// If delete manifests exist and apply_deletes is disabled (or not yet
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// implemented for this code path), skip compaction to avoid producing
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// incorrect results by dropping deletes.
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if len(deleteManifests) > 0 && !config.ApplyDeletes {
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return "compaction skipped: delete manifests present and apply_deletes is disabled", nil, nil
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}
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specsByID := specByID(meta)
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schema := meta.CurrentSchema()
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// Collect data file entries from data manifests
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var allEntries []iceberg.ManifestEntry
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for _, mf := range dataManifests {
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manifestData, err := loadFileByIcebergPath(ctx, filerClient, bucketName, dataPath, mf.FilePath())
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if err != nil {
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return "", nil, fmt.Errorf("read manifest %s: %w", mf.FilePath(), err)
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}
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entries, err := s3tables.ReadManifest(mf, manifestData, true, specsByID, schema)
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if err != nil {
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return "", nil, fmt.Errorf("parse manifest %s: %w", mf.FilePath(), err)
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}
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allEntries = append(allEntries, entries...)
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}
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// Collect delete entries if we need to apply deletes
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var positionDeletes map[string][]int64
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var eqDeleteGroups []equalityDeleteGroup
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var allDeleteEntries []iceberg.ManifestEntry
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if config.ApplyDeletes && len(deleteManifests) > 0 {
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for _, mf := range deleteManifests {
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manifestData, err := loadFileByIcebergPath(ctx, filerClient, bucketName, dataPath, mf.FilePath())
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if err != nil {
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return "", nil, fmt.Errorf("read delete manifest %s: %w", mf.FilePath(), err)
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}
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entries, err := s3tables.ReadManifest(mf, manifestData, true, specsByID, schema)
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if err != nil {
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return "", nil, fmt.Errorf("parse delete manifest %s: %w", mf.FilePath(), err)
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}
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allDeleteEntries = append(allDeleteEntries, entries...)
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}
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// Separate position and equality deletes, filtering by partition
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// predicate so out-of-scope deletes don't affect the merge.
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var posDeleteEntries, eqDeleteEntries []iceberg.ManifestEntry
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for _, entry := range allDeleteEntries {
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if predicate != nil {
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spec, ok := specsByID[int(entry.DataFile().SpecID())]
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if !ok {
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continue
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}
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match, err := predicate.Matches(spec, entry.DataFile().Partition())
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if err != nil {
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return "", nil, err
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}
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if !match {
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continue
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}
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}
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switch entry.DataFile().ContentType() {
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case iceberg.EntryContentPosDeletes:
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posDeleteEntries = append(posDeleteEntries, entry)
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case iceberg.EntryContentEqDeletes:
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eqDeleteEntries = append(eqDeleteEntries, entry)
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}
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}
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if len(posDeleteEntries) > 0 {
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positionDeletes, err = collectPositionDeletes(ctx, filerClient, bucketName, dataPath, posDeleteEntries)
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if err != nil {
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return "", nil, fmt.Errorf("collect position deletes: %w", err)
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}
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}
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if len(eqDeleteEntries) > 0 {
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eqDeleteGroups, err = collectEqualityDeletes(ctx, filerClient, bucketName, dataPath, eqDeleteEntries, schema)
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if err != nil {
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return "", nil, fmt.Errorf("collect equality deletes: %w", err)
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}
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}
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}
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candidateEntries := allEntries
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if predicate != nil {
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candidateEntries = make([]iceberg.ManifestEntry, 0, len(allEntries))
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for _, entry := range allEntries {
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spec, ok := specsByID[int(entry.DataFile().SpecID())]
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if !ok {
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continue
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}
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match, err := predicate.Matches(spec, entry.DataFile().Partition())
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if err != nil {
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return "", nil, err
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}
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if match {
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candidateEntries = append(candidateEntries, entry)
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}
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}
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}
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minInputFiles, err := compactionMinInputFiles(config.MinInputFiles)
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if err != nil {
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return "", nil, err
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}
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// Build compaction bins: group small data files by partition, each bin's
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// files in the order of their bounds so the merged file keeps the
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// ordering its inputs had.
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targetSize := compactionTargetSizeForPlan(config, rewritePlan)
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bins := buildCompactionBins(candidateEntries, targetSize, minInputFiles, meta)
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initialBinCount := len(bins)
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bins = filterCompactionBinsByPlan(bins, config, rewritePlan)
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if len(bins) == 0 {
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return compactionNoEligibleMessage(config, rewritePlan, initialBinCount), nil, nil
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}
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// Build a lookup from spec ID to PartitionSpec for per-bin manifest writing.
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specLookup := specsByID
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version := meta.Version()
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snapshotID := currentSnap.SnapshotID
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// Compute the snapshot ID for the commit up front so all manifest entries
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// reference the same snapshot that will actually be committed.
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newSnapID := time.Now().UnixMilli()
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// Random suffix for artifact filenames to avoid collisions between
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// concurrent compaction runs on different tables sharing a timestamp.
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artifactSuffix := compactRandomSuffix()
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// Process each bin: read source Parquet files, merge, write output
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var newManifestEntries []iceberg.ManifestEntry
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var deletedManifestEntries []iceberg.ManifestEntry
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var summary snapshotSummary
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totalMerged := 0
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entrySeqNum := func(entry iceberg.ManifestEntry) *int64 {
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seqNum := entry.SequenceNum()
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if seqNum < 0 {
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return nil
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}
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return &seqNum
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}
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entryFileSeqNum := func(entry iceberg.ManifestEntry) *int64 {
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if fileSeqNum := entry.FileSequenceNum(); fileSeqNum != nil {
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value := *fileSeqNum
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return &value
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}
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return entrySeqNum(entry)
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}
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metaDir := path.Join(s3tables.TablesPath, bucketName, dataPath, "metadata")
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dataDir := path.Join(s3tables.TablesPath, bucketName, dataPath, "data")
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// Track written artifacts so we can clean them up if the commit fails.
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type artifact struct {
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dir, fileName string
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}
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var writtenArtifacts []artifact
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committed := false
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defer func() {
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if committed || len(writtenArtifacts) == 0 {
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return
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}
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// Use a detached context so cleanup completes even if ctx was canceled.
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cleanupCtx, cancel := context.WithTimeout(context.Background(), 30*time.Second)
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defer cancel()
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for _, a := range writtenArtifacts {
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if err := deleteFilerFile(cleanupCtx, filerClient, a.dir, a.fileName); err != nil {
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glog.Warningf("iceberg compact: failed to clean up artifact %s/%s: %v", a.dir, a.fileName, err)
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}
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}
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}()
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for binIdx, bin := range bins {
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select {
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case <-ctx.Done():
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return "", nil, ctx.Err()
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default:
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}
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mergedFileName := fmt.Sprintf("compact-%d-%d-%s-%d.parquet", snapshotID, newSnapID, artifactSuffix, binIdx)
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mergedFilePath := absoluteIcebergPath(bucketName, dataPath, "data", mergedFileName)
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var mergedData []byte
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var recordCount int64
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rowGroupRows := rowsPerRowGroup(bin, config)
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if rewritePlan != nil && rewritePlan.strategy == "sort" {
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mergedData, recordCount, err = mergeParquetFilesSorted(ctx, filerClient, bucketName, dataPath, bin.Entries, positionDeletes, eqDeleteGroups, schema, rewritePlan, rowGroupRows)
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} else {
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mergedData, recordCount, err = mergeParquetFiles(ctx, filerClient, bucketName, dataPath, bin.Entries, positionDeletes, eqDeleteGroups, schema, rowGroupRows)
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}
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if err != nil {
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glog.Warningf("iceberg compact: failed to merge bin %d (%d files): %v", binIdx, len(bin.Entries), err)
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goto binDone
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}
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// Write merged file to filer
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if err := ensureFilerDir(ctx, filerClient, dataDir); err != nil {
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return "", nil, fmt.Errorf("ensure data dir: %w", err)
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}
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if err := saveFilerFile(ctx, filerClient, dataDir, mergedFileName, mergedData); err != nil {
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return "", nil, fmt.Errorf("save merged file: %w", err)
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}
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// Use the partition spec matching this bin's spec ID
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{
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binSpec, ok := specLookup[int(bin.SpecID)]
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if !ok {
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glog.Warningf("iceberg compact: spec %d not found for bin %d, skipping", bin.SpecID, binIdx)
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_ = deleteFilerFile(ctx, filerClient, dataDir, mergedFileName)
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goto binDone
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}
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// Create new DataFile entry for the merged file
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dfBuilder, err := iceberg.NewDataFileBuilder(
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binSpec,
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iceberg.EntryContentData,
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mergedFilePath,
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iceberg.ParquetFile,
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bin.Partition,
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nil, nil,
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recordCount,
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int64(len(mergedData)),
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)
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if err != nil {
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glog.Warningf("iceberg compact: failed to build data file entry for bin %d: %v", binIdx, err)
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_ = deleteFilerFile(ctx, filerClient, dataDir, mergedFileName)
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goto binDone
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}
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writtenArtifacts = append(writtenArtifacts, artifact{dir: dataDir, fileName: mergedFileName})
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// Record the column statistics readers prune files by; without
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// them every scan has to read every compacted file.
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if stats, statsErr := collectColumnStats(mergedData, schema); statsErr != nil {
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glog.Warningf("iceberg compact: no column statistics for %s: %v", mergedFileName, statsErr)
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} else {
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stats.applyTo(dfBuilder)
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}
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mergedDataFile := dfBuilder.Build()
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summary.addFile(mergedDataFile)
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newEntry := iceberg.NewManifestEntry(
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iceberg.EntryStatusADDED,
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&newSnapID,
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nil, nil,
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mergedDataFile,
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)
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newManifestEntries = append(newManifestEntries, newEntry)
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// Mark original entries as deleted
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for _, entry := range bin.Entries {
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summary.removeFile(entry.DataFile())
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delEntry := iceberg.NewManifestEntry(
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iceberg.EntryStatusDELETED,
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&newSnapID,
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entrySeqNum(entry), entryFileSeqNum(entry),
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entry.DataFile(),
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)
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deletedManifestEntries = append(deletedManifestEntries, delEntry)
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}
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totalMerged += len(bin.Entries)
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}
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binDone:
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if onProgress != nil {
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onProgress(binIdx, len(bins))
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}
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}
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if len(newManifestEntries) == 0 {
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return "no bins successfully compacted", nil, nil
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}
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// Build entries for the new manifests:
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// - ADDED entries for merged files
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// - DELETED entries for original files
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// - EXISTING entries for files that weren't compacted
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compactedPaths := make(map[string]struct{})
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for _, entry := range deletedManifestEntries {
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compactedPaths[entry.DataFile().FilePath()] = struct{}{}
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}
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// Group all manifest entries by spec ID for per-spec manifest writing.
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type specEntries struct {
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specID int32
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entries []iceberg.ManifestEntry
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}
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specEntriesMap := make(map[int32]*specEntries)
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addToSpec := func(specID int32, entry iceberg.ManifestEntry) {
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se, ok := specEntriesMap[specID]
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if !ok {
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se = &specEntries{specID: specID}
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specEntriesMap[specID] = se
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}
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se.entries = append(se.entries, entry)
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}
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// New and deleted entries carry the spec ID from their bin
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for _, entry := range newManifestEntries {
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addToSpec(entry.DataFile().SpecID(), entry)
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}
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for _, entry := range deletedManifestEntries {
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addToSpec(entry.DataFile().SpecID(), entry)
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}
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// Existing entries that weren't compacted
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for _, entry := range allEntries {
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if _, compacted := compactedPaths[entry.DataFile().FilePath()]; !compacted {
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existingEntry := iceberg.NewManifestEntry(
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iceberg.EntryStatusEXISTING,
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func() *int64 { id := entry.SnapshotID(); return &id }(),
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entrySeqNum(entry), entryFileSeqNum(entry),
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entry.DataFile(),
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)
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addToSpec(entry.DataFile().SpecID(), existingEntry)
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}
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}
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// Write one manifest per spec ID, iterating in sorted order for
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// deterministic manifest list construction.
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sortedSpecIDs := make([]int32, 0, len(specEntriesMap))
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for sid := range specEntriesMap {
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sortedSpecIDs = append(sortedSpecIDs, sid)
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}
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sort.Slice(sortedSpecIDs, func(i, j int) bool { return sortedSpecIDs[i] < sortedSpecIDs[j] })
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var allManifests []iceberg.ManifestFile
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for _, sid := range sortedSpecIDs {
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se := specEntriesMap[sid]
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ps, ok := specLookup[int(se.specID)]
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if !ok {
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return "", nil, fmt.Errorf("partition spec %d not found in table metadata", se.specID)
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}
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|
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var manifestBuf bytes.Buffer
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manifestFileName := fmt.Sprintf("compact-%d-%s-spec%d.avro", newSnapID, artifactSuffix, se.specID)
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newManifest, err := iceberg.WriteManifest(
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absoluteIcebergPath(bucketName, dataPath, "metadata", manifestFileName),
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&manifestBuf,
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version,
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ps,
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schema,
|
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newSnapID,
|
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se.entries,
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)
|
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if err != nil {
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return "", nil, fmt.Errorf("write compact manifest for spec %d: %w", se.specID, err)
|
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}
|
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|
|
if err := saveFilerFile(ctx, filerClient, metaDir, manifestFileName, manifestBuf.Bytes()); err != nil {
|
|
return "", nil, fmt.Errorf("save compact manifest for spec %d: %w", se.specID, err)
|
|
}
|
|
writtenArtifacts = append(writtenArtifacts, artifact{dir: metaDir, fileName: manifestFileName})
|
|
allManifests = append(allManifests, newManifest)
|
|
}
|
|
|
|
// Carry forward delete manifests only if deletes were NOT applied.
|
|
// When deletes were applied, they've been consumed during the merge.
|
|
// Position deletes reference specific data files — if all those files
|
|
// were compacted, the deletes are fully consumed. Equality deletes
|
|
// apply broadly, so they're only consumed if all data files were compacted.
|
|
carryDeletes := !config.ApplyDeletes || (len(positionDeletes) == 0 && len(eqDeleteGroups) == 0)
|
|
if !carryDeletes {
|
|
// Deletes still apply to any file that wasn't compacted.
|
|
for _, entry := range allEntries {
|
|
if _, compacted := compactedPaths[entry.DataFile().FilePath()]; !compacted {
|
|
carryDeletes = true
|
|
break
|
|
}
|
|
}
|
|
}
|
|
if carryDeletes {
|
|
allManifests = append(allManifests, deleteManifests...)
|
|
} else {
|
|
// All files were compacted, so the deletes leave the table with them.
|
|
for _, entry := range allDeleteEntries {
|
|
summary.removeFile(entry.DataFile())
|
|
}
|
|
}
|
|
|
|
// Write new manifest list
|
|
var manifestListBuf bytes.Buffer
|
|
seqNum := currentSnap.SequenceNumber + 1
|
|
err = iceberg.WriteManifestList(version, &manifestListBuf, newSnapID, &snapshotID, &seqNum, 0, allManifests)
|
|
if err != nil {
|
|
return "", nil, fmt.Errorf("write compact manifest list: %w", err)
|
|
}
|
|
|
|
manifestListFileName := fmt.Sprintf("snap-%d-%s.avro", newSnapID, artifactSuffix)
|
|
if err := saveFilerFile(ctx, filerClient, metaDir, manifestListFileName, manifestListBuf.Bytes()); err != nil {
|
|
return "", nil, fmt.Errorf("save compact manifest list: %w", err)
|
|
}
|
|
writtenArtifacts = append(writtenArtifacts, artifact{dir: metaDir, fileName: manifestListFileName})
|
|
|
|
// Commit: add new snapshot and update main branch ref
|
|
manifestListLocation := absoluteIcebergPath(bucketName, dataPath, "metadata", manifestListFileName)
|
|
err = h.commitWithRetry(ctx, filerClient, bucketName, tablePath, state.MetadataFileName, config, func(currentMeta table.Metadata, builder *table.MetadataBuilder) error {
|
|
// Guard: verify table head hasn't advanced since we planned.
|
|
cs := currentMeta.CurrentSnapshot()
|
|
if cs == nil || cs.SnapshotID != snapshotID {
|
|
return errStalePlan
|
|
}
|
|
|
|
newSnapshot := &table.Snapshot{
|
|
SnapshotID: newSnapID,
|
|
ParentSnapshotID: &snapshotID,
|
|
SequenceNumber: seqNum,
|
|
TimestampMs: newSnapID,
|
|
ManifestList: manifestListLocation,
|
|
Summary: summary.build(table.OpReplace, cs, map[string]string{
|
|
"maintenance": "compact_data_files",
|
|
"merged-files": fmt.Sprintf("%d", totalMerged),
|
|
"new-files": fmt.Sprintf("%d", len(newManifestEntries)),
|
|
"compaction-bins": fmt.Sprintf("%d", len(bins)),
|
|
"rewrite-strategy": rewritePlan.strategy,
|
|
}),
|
|
SchemaID: func() *int {
|
|
id := schema.ID
|
|
return &id
|
|
}(),
|
|
}
|
|
if rewritePlan != nil && rewritePlan.strategy == "sort" {
|
|
newSnapshot.Summary.Properties["sort-fields"] = rewritePlan.summaryLabel()
|
|
}
|
|
if err := builder.AddSnapshot(newSnapshot); err != nil {
|
|
return err
|
|
}
|
|
return builder.SetSnapshotRef(table.MainBranch, newSnapID, table.BranchRef)
|
|
})
|
|
if err != nil {
|
|
return "", nil, fmt.Errorf("commit compaction: %w", err)
|
|
}
|
|
|
|
committed = true
|
|
metrics := map[string]int64{
|
|
MetricFilesMerged: int64(totalMerged),
|
|
MetricFilesWritten: int64(len(newManifestEntries)),
|
|
MetricBins: int64(len(bins)),
|
|
MetricDurationMs: time.Since(start).Milliseconds(),
|
|
}
|
|
result := fmt.Sprintf("compacted %d files into %d (across %d bins)", totalMerged, len(newManifestEntries), len(bins))
|
|
if rewritePlan != nil && rewritePlan.strategy == "sort" {
|
|
result = fmt.Sprintf("%s using %s", result, rewritePlan.summaryLabel())
|
|
}
|
|
return result, metrics, nil
|
|
}
|
|
|
|
// buildCompactionBins groups small data files by partition for bin-packing.
|
|
// A file is "small" if it's below targetSize. A bin must have at least
|
|
// minFiles entries to be worth compacting.
|
|
//
|
|
// With an order, every bin lists its files by their bounds on the ordering
|
|
// column and an oversized partition is split into runs of consecutive files,
|
|
// so each merged file covers one contiguous range of that column. Without one
|
|
// the files keep manifest order and an oversized partition is packed
|
|
// largest-first.
|
|
func buildCompactionBins(entries []iceberg.ManifestEntry, targetSize int64, minFiles int, meta table.Metadata) []compactionBin {
|
|
if minFiles < 2 {
|
|
minFiles = 2
|
|
}
|
|
|
|
// Group entries by spec ID + partition key so that files from different
|
|
// partition specs are never mixed in the same compaction bin.
|
|
groups := make(map[string]*compactionBin)
|
|
for _, entry := range entries {
|
|
df := entry.DataFile()
|
|
// DuckDB writes "parquet" lowercase.
|
|
if !strings.EqualFold(string(df.FileFormat()), string(iceberg.ParquetFile)) {
|
|
continue
|
|
}
|
|
if df.FileSizeBytes() >= targetSize {
|
|
continue
|
|
}
|
|
|
|
partKey := partitionKey(df.Partition())
|
|
groupKey := fmt.Sprintf("spec%d\x00%s", df.SpecID(), partKey)
|
|
bin, ok := groups[groupKey]
|
|
if !ok {
|
|
bin = &compactionBin{
|
|
PartitionKey: partKey,
|
|
Partition: df.Partition(),
|
|
SpecID: df.SpecID(),
|
|
}
|
|
groups[groupKey] = bin
|
|
}
|
|
bin.Entries = append(bin.Entries, entry)
|
|
bin.TotalSize += df.FileSizeBytes()
|
|
}
|
|
|
|
// Filter to bins with enough files, splitting oversized bins. The merge
|
|
// order resolves per group over the files that survived the eligibility
|
|
// filter, so a file that can never participate (oversized, another
|
|
// format) cannot veto ordering for the ones that can.
|
|
var result []compactionBin
|
|
for _, bin := range groups {
|
|
if len(bin.Entries) < minFiles {
|
|
continue
|
|
}
|
|
order := resolveCompactionOrder(meta, bin.Entries)
|
|
order.sortEntries(bin.Entries)
|
|
if bin.TotalSize <= targetSize {
|
|
result = append(result, *bin)
|
|
} else if order != nil {
|
|
runs, leftover := splitOrderedBin(*bin, targetSize, minFiles)
|
|
result = append(result, runs...)
|
|
if order.bestEffort && len(leftover) > 0 {
|
|
runtBin := compactionBin{PartitionKey: bin.PartitionKey, Partition: bin.Partition, SpecID: bin.SpecID, Entries: leftover}
|
|
packed := splitOversizedBin(runtBin, targetSize, minFiles)
|
|
if len(packed) == 0 {
|
|
// Stragglers cannot merge even with each other; repacking
|
|
// the whole bin lets them pair across the ordered runs.
|
|
// Only replace the runs when the repack yields bins —
|
|
// otherwise the runs stay valid compaction work.
|
|
if full := splitOversizedBin(*bin, targetSize, minFiles); len(full) > 0 {
|
|
result = result[:len(result)-len(runs)]
|
|
packed = full
|
|
}
|
|
}
|
|
result = append(result, packed...)
|
|
}
|
|
} else {
|
|
result = append(result, splitOversizedBin(*bin, targetSize, minFiles)...)
|
|
}
|
|
}
|
|
|
|
// Sort by spec ID then partition key for deterministic order
|
|
sort.Slice(result, func(i, j int) bool {
|
|
if result[i].SpecID != result[j].SpecID {
|
|
return result[i].SpecID < result[j].SpecID
|
|
}
|
|
return result[i].PartitionKey < result[j].PartitionKey
|
|
})
|
|
|
|
return result
|
|
}
|
|
|
|
// splitOversizedBin splits a bin whose total size exceeds targetSize into
|
|
// sub-bins that stay under targetSize. Bins that cannot reach minFiles
|
|
// without violating targetSize are left uncompacted rather than merged into
|
|
// oversized bins.
|
|
func splitOversizedBin(bin compactionBin, targetSize int64, minFiles int) []compactionBin {
|
|
// Sort largest-first for better packing.
|
|
sorted := make([]iceberg.ManifestEntry, len(bin.Entries))
|
|
copy(sorted, bin.Entries)
|
|
sort.Slice(sorted, func(i, j int) bool {
|
|
return sorted[i].DataFile().FileSizeBytes() > sorted[j].DataFile().FileSizeBytes()
|
|
})
|
|
|
|
var bins []compactionBin
|
|
current := compactionBin{
|
|
PartitionKey: bin.PartitionKey,
|
|
Partition: bin.Partition,
|
|
SpecID: bin.SpecID,
|
|
}
|
|
for _, entry := range sorted {
|
|
if current.TotalSize > 0 && current.TotalSize+entry.DataFile().FileSizeBytes() > targetSize {
|
|
bins = append(bins, current)
|
|
current = compactionBin{
|
|
PartitionKey: bin.PartitionKey,
|
|
Partition: bin.Partition,
|
|
SpecID: bin.SpecID,
|
|
}
|
|
}
|
|
current.Entries = append(current.Entries, entry)
|
|
current.TotalSize += entry.DataFile().FileSizeBytes()
|
|
}
|
|
if len(current.Entries) > 0 {
|
|
bins = append(bins, current)
|
|
}
|
|
|
|
var valid []compactionBin
|
|
var pending []compactionBin
|
|
for _, candidate := range bins {
|
|
if len(candidate.Entries) >= minFiles {
|
|
valid = append(valid, candidate)
|
|
continue
|
|
}
|
|
pending = append(pending, candidate)
|
|
}
|
|
|
|
// Try to fold entries from underfilled bins into valid bins when they fit.
|
|
for _, runt := range pending {
|
|
for _, entry := range runt.Entries {
|
|
bestIdx := -1
|
|
bestRemaining := int64(-1)
|
|
entrySize := entry.DataFile().FileSizeBytes()
|
|
for i := range valid {
|
|
remaining := targetSize - valid[i].TotalSize - entrySize
|
|
if remaining < 0 {
|
|
continue
|
|
}
|
|
if bestIdx == -1 || remaining < bestRemaining {
|
|
bestIdx = i
|
|
bestRemaining = remaining
|
|
}
|
|
}
|
|
if bestIdx >= 0 {
|
|
valid[bestIdx].Entries = append(valid[bestIdx].Entries, entry)
|
|
valid[bestIdx].TotalSize += entrySize
|
|
}
|
|
}
|
|
}
|
|
|
|
if len(valid) == 0 {
|
|
return nil
|
|
}
|
|
return valid
|
|
}
|
|
|
|
// partitionKey creates a string key from a partition map for grouping.
|
|
// Values are JSON-encoded to avoid ambiguity when values contain commas or '='.
|
|
func partitionKey(partition map[int]any) string {
|
|
if len(partition) == 0 {
|
|
return "__unpartitioned__"
|
|
}
|
|
|
|
// Sort field IDs for deterministic key
|
|
ids := make([]int, 0, len(partition))
|
|
for id := range partition {
|
|
ids = append(ids, id)
|
|
}
|
|
sort.Ints(ids)
|
|
|
|
var parts []string
|
|
for _, id := range ids {
|
|
v, err := json.Marshal(partition[id])
|
|
if err != nil {
|
|
v = []byte(fmt.Sprintf("%x", fmt.Sprintf("%v", partition[id])))
|
|
}
|
|
parts = append(parts, fmt.Sprintf("%d=%s", id, v))
|
|
}
|
|
return strings.Join(parts, "\x00")
|
|
}
|
|
|
|
// collectPositionDeletes reads position delete Parquet files and returns a map
|
|
// from normalized data file path to sorted row positions that should be deleted.
|
|
// Paths are normalized so that absolute S3 URLs and relative paths match.
|
|
func collectPositionDeletes(
|
|
ctx context.Context,
|
|
filerClient filer_pb.SeaweedFilerClient,
|
|
bucketName, dataPath string,
|
|
deleteEntries []iceberg.ManifestEntry,
|
|
) (map[string][]int64, error) {
|
|
result := make(map[string][]int64)
|
|
for _, entry := range deleteEntries {
|
|
if entry.DataFile().ContentType() != iceberg.EntryContentPosDeletes {
|
|
continue
|
|
}
|
|
fileDeletes, err := readPositionDeleteFile(ctx, filerClient, bucketName, dataPath, entry.DataFile().FilePath())
|
|
if err != nil {
|
|
return nil, fmt.Errorf("read position delete file %s: %w", entry.DataFile().FilePath(), err)
|
|
}
|
|
for filePath, positions := range fileDeletes {
|
|
normalized, err := normalizeIcebergPath(filePath, bucketName, dataPath)
|
|
if err != nil {
|
|
return nil, fmt.Errorf("resolve deleted file %s: %w", filePath, err)
|
|
}
|
|
result[normalized] = append(result[normalized], positions...)
|
|
}
|
|
}
|
|
// Sort positions for each file (binary search during filtering)
|
|
for filePath := range result {
|
|
sort.Slice(result[filePath], func(i, j int) bool {
|
|
return result[filePath][i] < result[filePath][j]
|
|
})
|
|
}
|
|
return result, nil
|
|
}
|
|
|
|
// readPositionDeleteFile reads a position delete Parquet file and returns a map
|
|
// from data file path to row positions. The file must have columns "file_path"
|
|
// (string) and "pos" (int32 or int64).
|
|
func readPositionDeleteFile(
|
|
ctx context.Context,
|
|
filerClient filer_pb.SeaweedFilerClient,
|
|
bucketName, dataPath, filePath string,
|
|
) (map[string][]int64, error) {
|
|
data, err := loadFileByIcebergPath(ctx, filerClient, bucketName, dataPath, filePath)
|
|
if err != nil {
|
|
return nil, err
|
|
}
|
|
reader := parquet.NewReader(bytes.NewReader(data))
|
|
defer reader.Close()
|
|
|
|
pqSchema := reader.Schema()
|
|
filePathIdx := -1
|
|
posIdx := -1
|
|
for i, col := range pqSchema.Columns() {
|
|
name := strings.Join(col, ".")
|
|
switch name {
|
|
case "file_path":
|
|
filePathIdx = i
|
|
case "pos":
|
|
posIdx = i
|
|
}
|
|
}
|
|
if filePathIdx < 0 || posIdx < 0 {
|
|
return nil, fmt.Errorf("position delete file %s missing required columns (file_path=%d, pos=%d)", filePath, filePathIdx, posIdx)
|
|
}
|
|
|
|
result := make(map[string][]int64)
|
|
rows := make([]parquet.Row, 256)
|
|
for {
|
|
select {
|
|
case <-ctx.Done():
|
|
return nil, ctx.Err()
|
|
default:
|
|
}
|
|
n, readErr := reader.ReadRows(rows)
|
|
for i := 0; i < n; i++ {
|
|
row := rows[i]
|
|
fp := row[filePathIdx].String()
|
|
pos := row[posIdx].Int64()
|
|
result[fp] = append(result[fp], pos)
|
|
}
|
|
if readErr != nil {
|
|
if readErr == io.EOF {
|
|
break
|
|
}
|
|
return nil, readErr
|
|
}
|
|
}
|
|
return result, nil
|
|
}
|
|
|
|
// equalityDeleteGroup holds a set of delete keys for a specific set of equality field IDs.
|
|
// Different equality delete files may use different field IDs, so deletes are grouped.
|
|
type equalityDeleteGroup struct {
|
|
FieldIDs []int
|
|
Keys map[string]struct{}
|
|
}
|
|
|
|
// collectEqualityDeletes reads equality delete Parquet files and returns groups
|
|
// of delete keys, one per distinct set of equality field IDs. This correctly
|
|
// handles the case where different delete files use different equality columns.
|
|
func collectEqualityDeletes(
|
|
ctx context.Context,
|
|
filerClient filer_pb.SeaweedFilerClient,
|
|
bucketName, dataPath string,
|
|
deleteEntries []iceberg.ManifestEntry,
|
|
schema *iceberg.Schema,
|
|
) ([]equalityDeleteGroup, error) {
|
|
type groupState struct {
|
|
fieldIDs []int
|
|
keys map[string]struct{}
|
|
}
|
|
groups := make(map[string]*groupState)
|
|
|
|
for _, entry := range deleteEntries {
|
|
if entry.DataFile().ContentType() != iceberg.EntryContentEqDeletes {
|
|
continue
|
|
}
|
|
eqFieldIDs := entry.DataFile().EqualityFieldIDs()
|
|
if len(eqFieldIDs) == 0 {
|
|
continue
|
|
}
|
|
|
|
groupKey := fmt.Sprint(eqFieldIDs)
|
|
gs, ok := groups[groupKey]
|
|
if !ok {
|
|
gs = &groupState{fieldIDs: eqFieldIDs, keys: make(map[string]struct{})}
|
|
groups[groupKey] = gs
|
|
}
|
|
|
|
keys, err := readEqualityDeleteFile(ctx, filerClient, bucketName, dataPath, entry.DataFile().FilePath(), eqFieldIDs, schema)
|
|
if err != nil {
|
|
return nil, fmt.Errorf("read equality delete file %s: %w", entry.DataFile().FilePath(), err)
|
|
}
|
|
for k := range keys {
|
|
gs.keys[k] = struct{}{}
|
|
}
|
|
}
|
|
|
|
result := make([]equalityDeleteGroup, 0, len(groups))
|
|
for _, gs := range groups {
|
|
result = append(result, equalityDeleteGroup{FieldIDs: gs.fieldIDs, Keys: gs.keys})
|
|
}
|
|
return result, nil
|
|
}
|
|
|
|
// readEqualityDeleteFile reads an equality delete Parquet file and returns a set
|
|
// of composite keys built from the specified field IDs. The Iceberg schema is used
|
|
// to map field IDs to column names, which are then looked up in the Parquet schema.
|
|
func readEqualityDeleteFile(
|
|
ctx context.Context,
|
|
filerClient filer_pb.SeaweedFilerClient,
|
|
bucketName, dataPath, filePath string,
|
|
fieldIDs []int,
|
|
icebergSchema *iceberg.Schema,
|
|
) (map[string]struct{}, error) {
|
|
data, err := loadFileByIcebergPath(ctx, filerClient, bucketName, dataPath, filePath)
|
|
if err != nil {
|
|
return nil, err
|
|
}
|
|
reader := parquet.NewReader(bytes.NewReader(data))
|
|
defer reader.Close()
|
|
|
|
colIndices, err := resolveEqualityColIndices(reader.Schema(), fieldIDs, icebergSchema)
|
|
if err != nil {
|
|
return nil, fmt.Errorf("resolve columns in %s: %w", filePath, err)
|
|
}
|
|
|
|
result := make(map[string]struct{})
|
|
rows := make([]parquet.Row, 256)
|
|
for {
|
|
select {
|
|
case <-ctx.Done():
|
|
return nil, ctx.Err()
|
|
default:
|
|
}
|
|
n, readErr := reader.ReadRows(rows)
|
|
for i := 0; i < n; i++ {
|
|
key := buildEqualityKey(rows[i], colIndices)
|
|
result[key] = struct{}{}
|
|
}
|
|
if readErr != nil {
|
|
if readErr == io.EOF {
|
|
break
|
|
}
|
|
return nil, readErr
|
|
}
|
|
}
|
|
return result, nil
|
|
}
|
|
|
|
// buildEqualityKey builds a composite string key from specific column values
|
|
// in a row. Each value is serialized as "kind:length:value" to avoid ambiguity
|
|
// between types (e.g., int 123 vs string "123") and to prevent collisions from
|
|
// values containing separator characters.
|
|
func buildEqualityKey(row parquet.Row, colIndices []int) string {
|
|
if len(colIndices) == 1 {
|
|
v := row[colIndices[0]]
|
|
s := v.String()
|
|
return fmt.Sprintf("%d:%d:%s", v.Kind(), len(s), s)
|
|
}
|
|
var b strings.Builder
|
|
for _, idx := range colIndices {
|
|
v := row[idx]
|
|
s := v.String()
|
|
fmt.Fprintf(&b, "%d:%d:%s", v.Kind(), len(s), s)
|
|
}
|
|
return b.String()
|
|
}
|
|
|
|
// resolveEqualityColIndices maps Iceberg field IDs to Parquet column indices.
|
|
func resolveEqualityColIndices(pqSchema *parquet.Schema, fieldIDs []int, icebergSchema *iceberg.Schema) ([]int, error) {
|
|
if len(fieldIDs) == 0 {
|
|
return nil, nil
|
|
}
|
|
|
|
colNameToIdx := make(map[string]int)
|
|
for i, col := range pqSchema.Columns() {
|
|
colNameToIdx[strings.Join(col, ".")] = i
|
|
}
|
|
|
|
indices := make([]int, len(fieldIDs))
|
|
for i, fid := range fieldIDs {
|
|
field, ok := icebergSchema.FindFieldByID(fid)
|
|
if !ok {
|
|
return nil, fmt.Errorf("field ID %d not found in iceberg schema", fid)
|
|
}
|
|
idx, ok := colNameToIdx[field.Name]
|
|
if !ok {
|
|
return nil, fmt.Errorf("column %q (field ID %d) not found in parquet schema", field.Name, fid)
|
|
}
|
|
indices[i] = idx
|
|
}
|
|
return indices, nil
|
|
}
|
|
|
|
const (
|
|
// Iceberg's write.parquet.row-group-size-bytes default and PyIceberg's
|
|
// write.parquet.row-group-limit default.
|
|
defaultRowGroupSizeBytes = 128 * 1024 * 1024
|
|
defaultRowGroupRowLimit = 1048576
|
|
minRowGroupRows = 1024
|
|
)
|
|
|
|
// rowsPerRowGroup is the most rows one row group of a compacted file holds:
|
|
// the row limit, lowered so a row group stays near the byte size, estimated
|
|
// from the bin's inputs' bytes per row. parquet-go's writers have no limit of
|
|
// their own, so without one every compacted file is a single row group. The
|
|
// floor only protects the estimate — a configured row limit always wins.
|
|
func rowsPerRowGroup(bin compactionBin, config Config) int64 {
|
|
rows, sizeBytes := config.RowGroupRowLimit, config.RowGroupSizeBytes
|
|
explicit := rows > 0
|
|
if !explicit {
|
|
rows = defaultRowGroupRowLimit
|
|
}
|
|
if sizeBytes <= 0 {
|
|
sizeBytes = defaultRowGroupSizeBytes
|
|
}
|
|
var totalRows int64
|
|
for _, entry := range bin.Entries {
|
|
totalRows += entry.DataFile().Count()
|
|
}
|
|
if totalRows > 0 && bin.TotalSize > 0 {
|
|
bytesPerRow := max(bin.TotalSize/totalRows, 1)
|
|
estimated := sizeBytes / bytesPerRow
|
|
if !explicit {
|
|
estimated = max(estimated, minRowGroupRows)
|
|
}
|
|
rows = min(rows, estimated)
|
|
}
|
|
if !explicit {
|
|
rows = max(rows, minRowGroupRows)
|
|
}
|
|
return rows
|
|
}
|
|
|
|
// mergeParquetFiles reads multiple small Parquet files and merges them into
|
|
// a single Parquet file, optionally filtering out rows matching position or
|
|
// equality deletes. Files are processed one at a time to keep memory usage
|
|
// proportional to a single input file plus the output buffer.
|
|
func mergeParquetFiles(
|
|
ctx context.Context,
|
|
filerClient filer_pb.SeaweedFilerClient,
|
|
bucketName, dataPath string,
|
|
entries []iceberg.ManifestEntry,
|
|
positionDeletes map[string][]int64,
|
|
eqDeleteGroups []equalityDeleteGroup,
|
|
icebergSchema *iceberg.Schema,
|
|
rowGroupRows int64,
|
|
) ([]byte, int64, error) {
|
|
if len(entries) == 0 {
|
|
return nil, 0, fmt.Errorf("no entries to merge")
|
|
}
|
|
|
|
// Load the first file to obtain the schema for the writer.
|
|
firstData, err := loadFileByIcebergPath(ctx, filerClient, bucketName, dataPath, entries[0].DataFile().FilePath())
|
|
if err != nil {
|
|
return nil, 0, fmt.Errorf("read parquet file %s: %w", entries[0].DataFile().FilePath(), err)
|
|
}
|
|
firstReader := parquet.NewReader(bytes.NewReader(firstData))
|
|
parquetSchema := firstReader.Schema()
|
|
if parquetSchema == nil {
|
|
firstReader.Close()
|
|
return nil, 0, fmt.Errorf("no parquet schema found in %s", entries[0].DataFile().FilePath())
|
|
}
|
|
|
|
resolvedEqGroups, err := resolveEqualityDeleteGroupsForSchema(parquetSchema, eqDeleteGroups, icebergSchema)
|
|
if err != nil {
|
|
firstReader.Close()
|
|
return nil, 0, fmt.Errorf("resolve equality columns: %w", err)
|
|
}
|
|
|
|
var outputBuf bytes.Buffer
|
|
writer := parquet.NewWriter(&outputBuf, parquetSchema, parquet.MaxRowsPerRowGroup(rowGroupRows))
|
|
|
|
drainReader := func(reader *parquet.Reader, source string) (int64, error) {
|
|
return visitFilteredParquetRows(ctx, reader, source, bucketName, dataPath, positionDeletes, resolvedEqGroups, func(filtered []parquet.Row) error {
|
|
if _, err := writer.WriteRows(filtered); err != nil {
|
|
return fmt.Errorf("write rows from %s: %w", source, err)
|
|
}
|
|
return nil
|
|
})
|
|
}
|
|
|
|
// Drain the first file.
|
|
firstSource := entries[0].DataFile().FilePath()
|
|
totalRows, err := drainReader(firstReader, firstSource)
|
|
if err != nil {
|
|
writer.Close()
|
|
return nil, 0, err
|
|
}
|
|
firstData = nil // allow GC
|
|
|
|
// Process remaining files one at a time.
|
|
for _, entry := range entries[1:] {
|
|
select {
|
|
case <-ctx.Done():
|
|
writer.Close()
|
|
return nil, 0, ctx.Err()
|
|
default:
|
|
}
|
|
|
|
data, err := loadFileByIcebergPath(ctx, filerClient, bucketName, dataPath, entry.DataFile().FilePath())
|
|
if err != nil {
|
|
writer.Close()
|
|
return nil, 0, fmt.Errorf("read parquet file %s: %w", entry.DataFile().FilePath(), err)
|
|
}
|
|
|
|
reader := parquet.NewReader(bytes.NewReader(data))
|
|
if !schemasEqual(parquetSchema, reader.Schema()) {
|
|
reader.Close()
|
|
writer.Close()
|
|
return nil, 0, fmt.Errorf("schema mismatch in %s: cannot merge files with different schemas", entry.DataFile().FilePath())
|
|
}
|
|
|
|
rowsWritten, err := drainReader(reader, entry.DataFile().FilePath())
|
|
if err != nil {
|
|
writer.Close()
|
|
return nil, 0, err
|
|
}
|
|
totalRows += rowsWritten
|
|
// data goes out of scope here, eligible for GC before next iteration.
|
|
}
|
|
|
|
if err := writer.Close(); err != nil {
|
|
return nil, 0, fmt.Errorf("close writer: %w", err)
|
|
}
|
|
|
|
return outputBuf.Bytes(), totalRows, nil
|
|
}
|
|
|
|
type resolvedEqDeleteGroup struct {
|
|
colIndices []int
|
|
keys map[string]struct{}
|
|
}
|
|
|
|
func resolveEqualityDeleteGroupsForSchema(
|
|
parquetSchema *parquet.Schema,
|
|
eqDeleteGroups []equalityDeleteGroup,
|
|
icebergSchema *iceberg.Schema,
|
|
) ([]resolvedEqDeleteGroup, error) {
|
|
if len(eqDeleteGroups) == 0 || icebergSchema == nil {
|
|
return nil, nil
|
|
}
|
|
|
|
resolved := make([]resolvedEqDeleteGroup, 0, len(eqDeleteGroups))
|
|
for _, g := range eqDeleteGroups {
|
|
indices, err := resolveEqualityColIndices(parquetSchema, g.FieldIDs, icebergSchema)
|
|
if err != nil {
|
|
return nil, err
|
|
}
|
|
resolved = append(resolved, resolvedEqDeleteGroup{colIndices: indices, keys: g.Keys})
|
|
}
|
|
return resolved, nil
|
|
}
|
|
|
|
func visitFilteredParquetRows(
|
|
ctx context.Context,
|
|
reader *parquet.Reader,
|
|
source, bucketName, dataPath string,
|
|
positionDeletes map[string][]int64,
|
|
resolvedEqGroups []resolvedEqDeleteGroup,
|
|
onRows func([]parquet.Row) error,
|
|
) (int64, error) {
|
|
defer reader.Close()
|
|
|
|
rows := make([]parquet.Row, 256)
|
|
filteredRows := make([]parquet.Row, 0, len(rows))
|
|
normalizedSource, err := normalizeIcebergPath(source, bucketName, dataPath)
|
|
if err != nil {
|
|
return 0, err
|
|
}
|
|
posDeletes := positionDeletes[normalizedSource]
|
|
posDeleteIdx := 0
|
|
var absolutePos int64
|
|
var totalRows int64
|
|
|
|
for {
|
|
select {
|
|
case <-ctx.Done():
|
|
return totalRows, ctx.Err()
|
|
default:
|
|
}
|
|
|
|
n, readErr := reader.ReadRows(rows)
|
|
if n > 0 {
|
|
filteredRows = filteredRows[:0]
|
|
for i := 0; i < n; i++ {
|
|
rowPos := absolutePos + int64(i)
|
|
for posDeleteIdx < len(posDeletes) && posDeletes[posDeleteIdx] < rowPos {
|
|
posDeleteIdx++
|
|
}
|
|
if posDeleteIdx < len(posDeletes) && posDeletes[posDeleteIdx] == rowPos {
|
|
posDeleteIdx++
|
|
continue
|
|
}
|
|
|
|
deleted := false
|
|
for _, g := range resolvedEqGroups {
|
|
key := buildEqualityKey(rows[i], g.colIndices)
|
|
if _, ok := g.keys[key]; ok {
|
|
deleted = true
|
|
break
|
|
}
|
|
}
|
|
if deleted {
|
|
continue
|
|
}
|
|
|
|
filteredRows = append(filteredRows, rows[i])
|
|
}
|
|
absolutePos += int64(n)
|
|
if len(filteredRows) > 0 {
|
|
if err := onRows(filteredRows); err != nil {
|
|
return totalRows, err
|
|
}
|
|
totalRows += int64(len(filteredRows))
|
|
}
|
|
}
|
|
|
|
if readErr != nil {
|
|
if readErr == io.EOF {
|
|
return totalRows, nil
|
|
}
|
|
return totalRows, fmt.Errorf("read rows from %s: %w", source, readErr)
|
|
}
|
|
}
|
|
}
|
|
|
|
func mergeParquetFilesSorted(
|
|
ctx context.Context,
|
|
filerClient filer_pb.SeaweedFilerClient,
|
|
bucketName, dataPath string,
|
|
entries []iceberg.ManifestEntry,
|
|
positionDeletes map[string][]int64,
|
|
eqDeleteGroups []equalityDeleteGroup,
|
|
icebergSchema *iceberg.Schema,
|
|
rewritePlan *compactionRewritePlan,
|
|
rowGroupRows int64,
|
|
) ([]byte, int64, error) {
|
|
if len(entries) == 0 {
|
|
return nil, 0, fmt.Errorf("no entries to merge")
|
|
}
|
|
if rewritePlan == nil || rewritePlan.strategy != "sort" {
|
|
return nil, 0, fmt.Errorf("sorted merge requires sort rewrite plan")
|
|
}
|
|
|
|
firstData, err := loadFileByIcebergPath(ctx, filerClient, bucketName, dataPath, entries[0].DataFile().FilePath())
|
|
if err != nil {
|
|
return nil, 0, fmt.Errorf("read parquet file %s: %w", entries[0].DataFile().FilePath(), err)
|
|
}
|
|
firstReader := parquet.NewReader(bytes.NewReader(firstData))
|
|
parquetSchema := firstReader.Schema()
|
|
if parquetSchema == nil {
|
|
firstReader.Close()
|
|
return nil, 0, fmt.Errorf("no parquet schema found in %s", entries[0].DataFile().FilePath())
|
|
}
|
|
|
|
sortingColumns, err := rewritePlan.parquetSortingColumns(parquetSchema)
|
|
if err != nil {
|
|
firstReader.Close()
|
|
return nil, 0, fmt.Errorf("resolve parquet sorting columns: %w", err)
|
|
}
|
|
|
|
resolvedEqGroups, err := resolveEqualityDeleteGroupsForSchema(parquetSchema, eqDeleteGroups, icebergSchema)
|
|
if err != nil {
|
|
firstReader.Close()
|
|
return nil, 0, fmt.Errorf("resolve equality columns: %w", err)
|
|
}
|
|
|
|
// Sorted rewrites stream rows through parquet-go's sorting writer rather
|
|
// than holding the whole bin: rows accumulate until sortBufferRows, then a
|
|
// sorted run is encoded into a temporary row group, and Close merges the
|
|
// runs into the output. The runs live in files from a buffer pool instead
|
|
// of on the heap, so a bin larger than memory sorts rather than failing.
|
|
spillDir := rewritePlan.spillDir
|
|
if spillDir == "" {
|
|
// NewFileBufferPool takes filepath.Abs of what it is given, and
|
|
// filepath.Abs("") is the working directory, not the temp directory.
|
|
spillDir = os.TempDir()
|
|
}
|
|
sortBufferRows := rewritePlan.bufferRows
|
|
if sortBufferRows < minSortBufferRows {
|
|
sortBufferRows = defaultSortBufferRows
|
|
}
|
|
|
|
var outputBuf bytes.Buffer
|
|
writer := parquet.NewSortingWriter[any](&outputBuf, sortBufferRows, parquetSchema,
|
|
parquet.MaxRowsPerRowGroup(rowGroupRows),
|
|
parquet.SortingWriterConfig(
|
|
parquet.SortingColumns(sortingColumns...),
|
|
parquet.SortingBuffers(parquet.NewFileBufferPool(spillDir, "seaweedfs-iceberg-sort-*")),
|
|
),
|
|
)
|
|
// Closing returns the run files to the pool, which deletes them. A failure
|
|
// before that has to release them too, or the job leaves temp files behind.
|
|
closed := false
|
|
defer func() {
|
|
if !closed {
|
|
writer.Reset(io.Discard)
|
|
}
|
|
}()
|
|
|
|
writeRows := func(reader *parquet.Reader, source string) (int64, error) {
|
|
return visitFilteredParquetRows(ctx, reader, source, bucketName, dataPath, positionDeletes, resolvedEqGroups, func(filtered []parquet.Row) error {
|
|
// The writer's row buffer copies the values it is handed, so these
|
|
// rows need no cloning out of the reader's own buffer first.
|
|
_, writeErr := writer.WriteRows(filtered)
|
|
return writeErr
|
|
})
|
|
}
|
|
|
|
totalRows, err := writeRows(firstReader, entries[0].DataFile().FilePath())
|
|
if err != nil {
|
|
return nil, 0, err
|
|
}
|
|
|
|
for _, entry := range entries[1:] {
|
|
select {
|
|
case <-ctx.Done():
|
|
return nil, 0, ctx.Err()
|
|
default:
|
|
}
|
|
|
|
data, err := loadFileByIcebergPath(ctx, filerClient, bucketName, dataPath, entry.DataFile().FilePath())
|
|
if err != nil {
|
|
return nil, 0, fmt.Errorf("read parquet file %s: %w", entry.DataFile().FilePath(), err)
|
|
}
|
|
|
|
reader := parquet.NewReader(bytes.NewReader(data))
|
|
if !schemasEqual(parquetSchema, reader.Schema()) {
|
|
reader.Close()
|
|
return nil, 0, fmt.Errorf("schema mismatch in %s: cannot merge files with different schemas", entry.DataFile().FilePath())
|
|
}
|
|
|
|
rowsWritten, err := writeRows(reader, entry.DataFile().FilePath())
|
|
if err != nil {
|
|
return nil, 0, err
|
|
}
|
|
totalRows += rowsWritten
|
|
}
|
|
|
|
if err := writer.Close(); err != nil {
|
|
return nil, 0, fmt.Errorf("close sorting writer: %w", err)
|
|
}
|
|
closed = true
|
|
|
|
return outputBuf.Bytes(), totalRows, nil
|
|
}
|
|
|
|
// compactRandomSuffix returns a short random hex string for use in artifact
|
|
// filenames to prevent collisions between concurrent runs.
|
|
func compactRandomSuffix() string {
|
|
b := make([]byte, 4)
|
|
if _, err := rand.Read(b); err != nil {
|
|
return fmt.Sprintf("%x", time.Now().UnixNano()&0xFFFFFFFF)
|
|
}
|
|
return hex.EncodeToString(b)
|
|
}
|
|
|
|
// schemasEqual compares two parquet schemas structurally.
|
|
func schemasEqual(a, b *parquet.Schema) bool {
|
|
if a == b {
|
|
return true
|
|
}
|
|
if a == nil || b == nil {
|
|
return false
|
|
}
|
|
return parquet.EqualNodes(a, b)
|
|
}
|
|
|
|
// ensureFilerDir ensures a directory exists in the filer.
|
|
func ensureFilerDir(ctx context.Context, client filer_pb.SeaweedFilerClient, dirPath string) error {
|
|
parentDir := path.Dir(dirPath)
|
|
dirName := path.Base(dirPath)
|
|
|
|
_, err := filer_pb.LookupEntry(ctx, client, &filer_pb.LookupDirectoryEntryRequest{
|
|
Directory: parentDir,
|
|
Name: dirName,
|
|
})
|
|
if err == nil {
|
|
return nil // already exists
|
|
}
|
|
if !errors.Is(err, filer_pb.ErrNotFound) && status.Code(err) != codes.NotFound {
|
|
return fmt.Errorf("lookup dir %s: %w", dirPath, err)
|
|
}
|
|
|
|
resp, createErr := client.CreateEntry(ctx, &filer_pb.CreateEntryRequest{
|
|
Directory: parentDir,
|
|
Entry: &filer_pb.Entry{
|
|
Name: dirName,
|
|
IsDirectory: true,
|
|
Attributes: &filer_pb.FuseAttributes{
|
|
Mtime: time.Now().Unix(),
|
|
Crtime: time.Now().Unix(),
|
|
FileMode: uint32(0755),
|
|
},
|
|
},
|
|
})
|
|
if createErr != nil {
|
|
return createErr
|
|
}
|
|
if resp.Error != "" && !strings.Contains(resp.Error, "exist") {
|
|
return fmt.Errorf("create dir %s: %s", dirPath, resp.Error)
|
|
}
|
|
return nil
|
|
}
|